BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022F12LP1|AL427939
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 1900 0.0
>3x_Contig1802
Length = 45229
Score = 1900 bits (957), Expect = 0.0
Identities = 959/961 (99%)
Strand = Plus / Plus
Query: 1 atctaaactgctatcaattgttcgcttcagatgacgcttcagaagatgggaatgaggggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29028 atctaaactgctatcaattgttcgcttcagatgacgcttcagaagatgggaatgaggggt 29087
Query: 61 tgcacaagcgttggtattttccaggaggagcagcttggaaaacatttggtaaatataaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29088 tgcacaagcgttggtattttccaggaggagcagcttggaaaacatttggtaaatataaag 29147
Query: 121 cccaagtatttgcactgaatgctgttgcttctgtattatcgggttgtggcgaccaagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29148 cccaagtatttgcactgaatgctgttgcttctgtattatcgggttgtggcgaccaagttg 29207
Query: 181 ttgaattcggaagatcagctctatgtgctagtaccaatgggcaatacgggtgtttatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29208 ttgaattcggaagatcagctctatgtgctagtaccaatgggcaatacgggtgtttatcct 29267
Query: 241 ggtcgggtggtggacattccatggtgtgttcaataggtaagtcgattattttgcaaggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29268 ggtcgggtggtggacattccatggtgtgttcaataggtaagtcgattattttgcaaggca 29327
Query: 301 tttctggaatgggtgaatttgcttatgttagtgagcatgcctctcattgttttgaatcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29328 tttctggaatgggtgaatttgcttatgttagtgagcatgcctctcattgttttgaatcct 29387
Query: 361 ctgcttggcactcatgctgtctttcaaataggccagacggttgctcttagatgcaatttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29388 ctgcttggcactcatgctgtctttcaaataggccagacggttgctcttagatgcaatttt 29447
Query: 421 gagttttaatcacttatgacgcgattttaagtcaataatcaatatgctcaaagttcttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29448 gagttttaatcacttatgacgcgattttaagtcaataatcaatatgctcaaagttcttct 29507
Query: 481 atgttgtgcttaccgtaaattatttgagttgtttttgatttcatatttccttgcgaagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29508 atgttgtgcttaccgtaaattatttgagttgtttttgatttcatatttccttgcgaagac 29567
Query: 541 ttggcaaaccatgactatccttttttcctcaactatgatcagaaatctgtaagtmaataa 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 29568 ttggcaaaccatgactatccttttttcctcaactatgatcagaaatctgtaagtaaataa 29627
Query: 601 actaaaaaatgtagaaactgccgtaattcatcatgttctgaagcgtatcttattgacgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29628 actaaaaaatgtagaaactgccgtaattcatcatgttctgaagcgtatcttattgacgaa 29687
Query: 661 tctctactctaagaattgcacaatagctaatatccgtgcatattgaaccggacaattagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29688 tctctactctaagaattgcacaatagctaatatccgtgcatattgaaccggacaattagt 29747
Query: 721 agaaatagtaaccgagactttattcaaaggcgttgaagtaggtactacgattagtataaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29748 agaaatagtaaccgagactttattcaaaggcgttgaagtaggtactacgattagtataaa 29807
Query: 781 cagagcctttagaaagagtgattgcgcggccatgacatttattaacagtattgtaactgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29808 cagagcctttagaaagagtgattgcgcggccatgacatttattaacagtattgtaactgt 29867
Query: 841 gcgttttcgtcatagaataaagcggaatagctaaagaataactgatcactgtgtgaatgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29868 gcgttttcgtcatagaataaagcggaatagctaaagaataactgatcactgtgtgaatgt 29927
Query: 901 tgagttattcagtctcagagcyactgtttctcacgcctgtttatcagcattatttcggag 960
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 29928 tgagttattcagtctcagagctactgtttctcacgcctgtttatcagcattatttcggag 29987
Query: 961 t 961
|
Sbjct: 29988 t 29988
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6122
Number of Sequences: 1807
Number of extensions: 6122
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)